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en:data:mite [2018/03/30 23:04]
127.0.0.1 external edit
en:data:mite [2019/02/06 14:00] (current)
David Zelený
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 ===== Source of data ===== ===== Source of data =====
-Used as example dataset in Borcard et al. (2011); first used in Borcard et al. (1992).+Used as example dataset in Borcard et al. (2011, 2018); the dataset was first used in Borcard et al. (1992), and details are in Borcard & Legendre (1994). 
 ===== Description of the dataset ===== ===== Description of the dataset =====
 <wrap lo>(from Borcard et al. 2011)</​wrap>​ <wrap lo>(from Borcard et al. 2011)</​wrap>​
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 |SubsDens|Substrate density (dry matter) [g dm<​sup>​-3</​sup>​] ​ | |SubsDens|Substrate density (dry matter) [g dm<​sup>​-3</​sup>​] ​ |
 |WatrCont|Water content [g dm<​sup>​-3</​sup>​] ​ | |WatrCont|Water content [g dm<​sup>​-3</​sup>​] ​ |
-|Substrate|Substrate [7 unordered classes] ​ |+|Substrate|Substrate [7 unordered classes; 6 substrate types + interface category]  |
 |Shrub|Shrubs [3 ordered classes] ​ | |Shrub|Shrubs [3 ordered classes] ​ |
 |Topo|Microtopography [Blanket - Hummock] ​ | |Topo|Microtopography [Blanket - Hummock] ​ |
 +
 +<​imgcaption mites_map|Map of the studied samples, distribution of substratum types, shrub cover and mircotopography (Figs. 1 and 2 from Borcard & Legendre 1994).>​{{:​obrazky:​mites_map_borcard-legendre1994.jpg?​direct|}}</​imgcaption>​
 +
 ===== R script for direct import of data to R ===== ===== R script for direct import of data to R =====
 <code rsplus> <code rsplus>
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 mite.env <- read.delim ('​https://​raw.githubusercontent.com/​zdealveindy/​anadat-r/​master/​data/​mite_env.txt'​) mite.env <- read.delim ('​https://​raw.githubusercontent.com/​zdealveindy/​anadat-r/​master/​data/​mite_env.txt'​)
 mite.xy <- read.delim ('​https://​raw.githubusercontent.com/​zdealveindy/​anadat-r/​master/​data/​mite_xy.txt'​) mite.xy <- read.delim ('​https://​raw.githubusercontent.com/​zdealveindy/​anadat-r/​master/​data/​mite_xy.txt'​)
 + 
 </​code>​ </​code>​
  
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 ===== References ===== ===== References =====
   *Borcard, D., Legendre, P. & Drapeau, P. (1992) Partialling out the spatial component of ecological variation. //Ecology// 73: 1045-1055.   *Borcard, D., Legendre, P. & Drapeau, P. (1992) Partialling out the spatial component of ecological variation. //Ecology// 73: 1045-1055.
 +  *Borcard, D. & Legendre, P. (1994) Environmental control and spatial structure in ecological communities:​ an example using oribatid mites (Acari, Oribatei). //​Environmental and Ecological Statistics//​ 1: 37-61.
   *Borcard, D., Gillet, F. & Legendre, P. (2011) Numerical Ecology with R. Springer, UseR! Edition.   *Borcard, D., Gillet, F. & Legendre, P. (2011) Numerical Ecology with R. Springer, UseR! Edition.
en/data/mite.1522422283.txt.gz · Last modified: 2018/03/30 23:04 by 127.0.0.1