en:numecolr
Table of Contents
Numerical Ecology with R: Custom R functions
Second edition (Borcard et al. 2018)
The source of the scripts below can be found here: http://adn.biol.umontreal.ca/~numericalecology/numecolR/. The link to GitHub repository of all NumEcolR functions: https://github.com/zdealveindy/anadat-r/tree/master/scripts/NumEcolR2
In the list below, find the name of the function, and use the source command to download it into your R.
# CA.newr
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/CA.newr.R')
# PCA.newr
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/PCA.newr.R')
# Rao
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/Rao.R')
# bartlett.perm
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/bartlett.perm.R')
# boxplerk
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/boxplerk.R')
# boxplert
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/boxplert.R')
# cleanplot.pca
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/cleanplot.pca.R')
# coldiss
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/coldiss.R')
# drawmap
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/drawmap.R')
# drawmap3
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/drawmap3.R')
# hcoplot
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/hcoplot.R')
# panelutils
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/panelutils.R')
# plot.lda
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/plot.lda.R')
# plot.links
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/plot.links.R')
# polyvars
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/polyvars.R')
# quickMEM
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/quickMEM.R')
# scalog
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/scalog.R')
# screestick
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/screestick.R')
# sr.value
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/sr.value.R')
# triplot.rda
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/triplot.rda.R')
First edition (Borcard et al. 2011)
The source of the scripts can be downloaded from here: http://adn.biol.umontreal.ca/~numericalecology/numecolR/NEwR_1st_edition_R332.zip. The link to GitHub repository of all NumEcolR functions: https://github.com/zdealveindy/anadat-r/tree/master/scripts/NumEcolR1.
In the list below, find the name of the function, and use the source command to download it into your R.
# CA
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/CA.R')
# PCA
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/PCA.R')
# cleanplot.pca
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/cleanplot.pca.R')
# coldiss
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/coldiss.R')
# create.MEM.model
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/create.MEM.model.R')
# evplot
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/evplot.R')
# grpdist
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/grpdist.R')
# hcoplot
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/hcoplot.R')
# panelutils
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/panelutils.R')
# pcacircle
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/pcacircle.R')
# plot.distmat.links
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/plot.distmat.links.R')
# plot.links
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/plot.links.R')
# sr.value
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/sr.value.R')
# test.a
source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/test.a.R')
en/numecolr.txt · Last modified: 2019/02/06 17:22 by David Zelený