en:numecolr
Table of Contents
Numerical Ecology with R: Custom R functions
Second edition (Borcard et al. 2018)
The source of the scripts below can be found here: http://adn.biol.umontreal.ca/~numericalecology/numecolR/. The link to GitHub repository of all NumEcolR functions: https://github.com/zdealveindy/anadat-r/tree/master/scripts/NumEcolR2
In the list below, find the name of the function, and use the source
command to download it into your R.
# CA.newr source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/CA.newr.R') # PCA.newr source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/PCA.newr.R') # Rao source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/Rao.R') # bartlett.perm source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/bartlett.perm.R') # boxplerk source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/boxplerk.R') # boxplert source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/boxplert.R') # cleanplot.pca source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/cleanplot.pca.R') # coldiss source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/coldiss.R') # drawmap source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/drawmap.R') # drawmap3 source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/drawmap3.R') # hcoplot source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/hcoplot.R') # panelutils source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/panelutils.R') # plot.lda source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/plot.lda.R') # plot.links source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/plot.links.R') # polyvars source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/polyvars.R') # quickMEM source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/quickMEM.R') # scalog source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/scalog.R') # screestick source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/screestick.R') # sr.value source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/sr.value.R') # triplot.rda source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR2/triplot.rda.R')
First edition (Borcard et al. 2011)
The source of the scripts can be downloaded from here: http://adn.biol.umontreal.ca/~numericalecology/numecolR/NEwR_1st_edition_R332.zip. The link to GitHub repository of all NumEcolR functions: https://github.com/zdealveindy/anadat-r/tree/master/scripts/NumEcolR1.
In the list below, find the name of the function, and use the source
command to download it into your R.
# CA source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/CA.R') # PCA source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/PCA.R') # cleanplot.pca source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/cleanplot.pca.R') # coldiss source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/coldiss.R') # create.MEM.model source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/create.MEM.model.R') # evplot source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/evplot.R') # grpdist source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/grpdist.R') # hcoplot source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/hcoplot.R') # panelutils source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/panelutils.R') # pcacircle source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/pcacircle.R') # plot.distmat.links source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/plot.distmat.links.R') # plot.links source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/plot.links.R') # sr.value source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/sr.value.R') # test.a source ('https://raw.githubusercontent.com/zdealveindy/anadat-r/master/scripts/NumEcolR1/test.a.R')
en/numecolr.txt · Last modified: 2019/02/06 17:22 by David Zelený